GTEx V9
Gene Name : collagen type VI alpha 3 chain
NCBI GeneID : 1293 NCBI : NM_004369.4 NCBI : NP_004360.2
Chromosome : 2 Strand : -
MANE Select : ENST00000295550 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE COL6A3 ENSG00000163359 237324018 237414164
GTEx V9 COL6A3 ENSG00000163359 237324002 237414375
Gencode v40 COL6A3 ENSG00000163359 237324002 237414328

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000491769 20 6731 5 0 9 27.67 1 ENST00000491769 20 6731 4 0 11
ENST00000473258 2 5433 6 0 9 23.97 2 ENST00000473258 2 5433 5 0 11
ENST00000392003 7 3464 8 3111 6 15.63 3 ENST00000392003 7 3464 7 3111 5
ENST00000295550 44 10749 1 9534 1 14.59 4 P:1 ENST00000295550 44 10532 1 9534 1 P:1
ENST00000491233 2 652 12 522 8 5.52 5 ENST00000491233 2 652 17 0 11
ENST00000493475 2 669 11 0 9 4.53 6 ENST00000493475 2 669 16 0 11
ENST00000353578 43 9963 2 8916 2 3.30 7 ENST00000353578 43 9636 2 8916 2
ENST00000493608 2 742 10 0 9 2.88 8 ENST00000493608 2 742 15 0 11
ENST00000433762 6 2379 9 2124 7 1.28 9 ENST00000433762 6 2379 10 2124 6
ENST00000347401 41 8625 4 7710 4 0.20 10 ENST00000347401 8 2670 8 1915 7
ENST00000392004 8 4037 7 3714 5 0.19 11 ENST00000392004 8 4037 6 3714 4
ENST00000472056 41 8628 3 7713 3 0.13 12 ENST00000472056 41 8628 3 7713 3
ENST00000468792 2 329 13 0 9 0.11 13 ENST00000468792 2 329 19 0 11
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000682405 3 289 20 0 11
ENST00000000000 ENST00000682957 8 2416 9 682 8
ENST00000000000 ENST00000683145 3 1154 14 0 11
ENST00000000000 ENST00000683155 2 1211 12 0 11
ENST00000000000 ENST00000683348 4 1155 13 141 10
ENST00000000000 ENST00000684508 4 1341 11 0 11
ENST00000000000 ENST00000684597 3 414 18 414 9

ENSG00000163359 COL6A3

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