TEXMST Gene Info

PTPN13

GTEx V9

Gene Name : protein tyrosine phosphatase non-receptor type 13

GTEx V8

NCBI GeneID : 5783	NCBI : NM_080683.3	NCBI : NP_542414.1
Chromosome : 4	Strand : +
MANE Select : ENST00000411767	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	PTPN13	ENSG00000163629	86594315	86815161
GTEx V9	PTPN13	ENSG00000163629	86594314	86815171
Gencode v40	PTPN13	ENSG00000163629	86594314	86815171

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000436978	48	8573	1	7473	1	71.16	1		A:2	ENST00000436978	48	8573	1	7473	1		A:2
	ENST00000427191	47	8487	2	7401	3	17.93	2		A:2	ENST00000427191	47	8487	3	7401	4		A:2
	ENST00000502971	6	1708	5	684	5	8.15	3			ENST00000502971	6	1708	6	684	6
	ENST00000511105	4	645	6	0	6	1.29	4			ENST00000511105	4	645	7	0	8
	ENST00000316707	45	7546	4	6885	4	0.88	5		A:2	ENST00000316707	45	7546	5	6885	5		A:2
	ENST00000411767	48	8119	3	7458	2	0.59	6	☀	P:4	ENST00000411767	48	8548	2	7458	3	☀	P:4

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000507902	5	516	8	417	7
	ENST00000000000										ENST00000508063	3	457	9	0	8
	ENST00000000000										ENST00000511467	47	8076	4	7473	1		A:2

ENSG00000163629 PTPN13

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