GTEx V9
Gene Name : paired like homeodomain 2
NCBI GeneID : 5308 NCBI : NM_000325.6 NCBI : NP_000316.2
Chromosome : 4 Strand : -
MANE Select : ENST00000644743 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE PITX2 ENSG00000164093 110617423 110623077
GTEx V9 PITX2 ENSG00000164093 110617422 110642123
Gencode v40 PITX2 ENSG00000164093 110617422 110642123

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000607868 1 1398 8 0 8 2.09 5 ENST00000607868 1 1398 9 0 10
ENST00000556049 2 941 9 0 8 3.08 4 ENST00000556049 2 941 13 0 10
ENST00000557119 2 1889 6 795 6 8.90 2 ENST00000557119 2 1889 5 795 7
ENST00000355080 4 2100 4 816 5 0.16 9 P:4 ENST00000355080 4 2100 3 816 6 P:4
ENST00000394595 4 1693 7 525 7 0.75 6 A:1 ENST00000394595 5 1897 4 954 2 A:1
ENST00000613094 6 3240 2 954 2 6.72 3 ENST00000613094 4 1693 7 525 8
ENST00000354925 7 3359 1 954 2 0.68 7 A:1 ENST00000354925 7 3359 1 954 2 A:1
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000306732 3 2320 3 975 1 77.42 1 ENST00000000000
ENST00000394598 5 1906 5 954 2 0.21 8 ENST00000000000
ENST00000000000 ENST00000511837 5 1085 12 870 5
ENST00000000000 ENST00000511990 4 463 14 355 9
ENST00000000000 ENST00000614423 4 1718 6 873 4
ENST00000000000 ENST00000616641 3 1139 11 0 10
ENST00000000000 ENST00000644488 3 1143 10 0 10
ENST00000000000 ENST00000644743 3 2294 2 975 1 A:1
ENST00000000000 ENST00000645131 3 1608 8 0 10

ENSG00000164093 PITX2

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