GTEx V9
Gene Name : ubiquitin specific peptidase 39
NCBI GeneID : 10713 NCBI : NM_006590.4 NCBI : NP_006581.2
Chromosome : 2 Strand : +
MANE Select : ENST00000323701 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE USP39 ENSG00000168883 85616186 85649283
GTEx V9 USP39 ENSG00000168883 85602855 85649282
Gencode v40 USP39 ENSG00000168883 85602855 85649283

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000323701 13 2177 1 1698 1 46.90 1 P:1 ENST00000323701 13 2183 1 1698 1 P:1
ENST00000465514 4 660 10 0 8 0.80 9 ENST00000465514 4 660 11 0 11
ENST00000409470 14 2034 4 1698 1 22.01 2 P:1 ENST00000409470 14 2034 5 1698 1 P:1
ENST00000459775 13 2148 3 0 8 16.13 3 ENST00000459775 13 2148 3 0 11
ENST00000455732 4 623 12 0 8 0.09 11 ENST00000455732 4 623 13 0 11
ENST00000493829 11 1660 7 0 8 0.81 8 ENST00000493829 11 1660 8 0 11
ENST00000496047 3 554 13 0 8 9.24 4 ENST00000496047 3 554 17 0 11
ENST00000613444 13 2161 2 1464 5 1.22 6 ENST00000613444 13 2161 2 1464 5
ENST00000490193 6 1028 8 0 8 0.06 12 ENST00000490193 6 1028 9 0 11
ENST00000458268 5 751 9 465 6 0.04 13 ENST00000458268 5 751 10 465 7
ENST00000491659 5 648 11 0 8 0.02 14 ENST00000491659 5 648 12 0 11
ENST00000481409 2 447 14 0 8 1.44 5 ENST00000481409 2 447 18 0 11
ENST00000409025 13 1946 6 1611 3 0.88 7 ENST00000409025 13 1946 7 1611 3
ENST00000409766 12 2033 5 1467 4 0.32 10 ENST00000409766 12 2033 6 1467 4
ENST00000467885 4 338 15 186 7 0.02 15 ENST00000467885 4 338 19 186 10
ENST00000474572 3 293 16 0 8 0.01 16 ENST00000474572 3 293 20 0 11
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000442708 4 561 16 340 9
ENST00000000000 ENST00000448971 5 610 14 387 8
ENST00000000000 ENST00000450066 12 2086 4 1389 6
ENST00000000000 ENST00000465282 4 568 15 0 11

ENSG00000168883 USP39

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