| NCBI GeneID : 6470 | NCBI : NM_004169.5 | NCBI : NP_004160.3 |
|---|---|---|
| Chromosome : 17 | Strand : - | |
| MANE Select : ENST00000316694 | MANE Plus Clinical : |
| Gene Symbol | Ensembl Gene ID | Start | End | |
| MANE | SHMT1 | ENSG00000176974 | 18327873 | 18363550 |
|---|---|---|---|---|
| GTEx V9 | SHMT1 | ENSG00000176974 | 18327859 | 18363563 |
| Gencode v40 | SHMT1 | ENSG00000176974 | 18327859 | 18363563 |
| Gencode v26 (GTEx V9) | Gencode v40 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| V9 |
Transcript ID | Exon Count |
Transcript Length |
Tx Length Rank |
CDS Length |
CDS Rank |
Exp Tx% |
Exp Rank |
MANE Match |
APPRIS | Transcript ID | Exon Count |
Transcript Length |
Tx Length Rank |
CDS Length |
CDS Rank |
MANE Match |
APPRIS |
| ☉ | ENST00000316694 | 12 | 2464 | 3 | 1452 | 1 | 62.68 | 1 | ☀ | P:1 | ENST00000316694 | 12 | 2527 | 3 | 1452 | 1 | ☀ | P:1 |
| ENST00000395684 | 7 | 2652 | 2 | 0 | 7 | 19.77 | 2 | ENST00000395684 | 7 | 2652 | 2 | 0 | 7 | |||||
| ENST00000354098 | 11 | 1656 | 5 | 1335 | 2 | 9.92 | 3 | ENST00000354098 | 11 | 1656 | 6 | 1335 | 2 | |||||
| ENST00000582352 | 1 | 2756 | 1 | 0 | 7 | 2.28 | 4 | ENST00000582352 | 1 | 2756 | 1 | 0 | 7 | |||||
| ENST00000395682 | 3 | 570 | 8 | 0 | 7 | 1.75 | 5 | ENST00000395682 | 3 | 570 | 9 | 0 | 7 | |||||
| ENST00000352886 | 11 | 2437 | 4 | 1038 | 3 | 1.61 | 6 | ENST00000352886 | 11 | 2437 | 4 | 1038 | 3 | |||||
| ENST00000579558 | 6 | 1077 | 6 | 0 | 7 | 0.78 | 8 | ENST00000579558 | 6 | 1077 | 7 | 0 | 7 | |||||
| ENST00000582653 | 5 | 879 | 7 | 501 | 4 | 0.17 | 9 | ENST00000582653 | 5 | 879 | 8 | 501 | 4 | |||||
| ENST00000583780 | 3 | 332 | 10 | 3 | 6 | 0.17 | 10 | ENST00000583780 | 3 | 332 | 10 | 3 | 6 | |||||
| Gencode v26 (GTEx V9) | Gencode v40 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| V9 |
No Match Transcript ID |
Exon Count |
Transcript Length |
Tx Length Rank |
CDS Length |
CDS Rank |
Exp Tx% |
Exp Rank |
MANE Match |
APPRIS | No Match Transcript ID |
Exon Count |
Transcript Length |
Tx Length Rank |
CDS Length |
CDS Rank |
MANE Match |
APPRIS |
| ENST00000618902 | 6 | 378 | 9 | 378 | 5 | 0.87 | 7 | ENST00000000000 | ||||||||||
| ENST00000000000 | ENST00000580002 | 11 | 1759 | 5 | 387 | 5 | ||||||||||||