TEXMST Gene Info

HLA

GTEx V9

Gene Name : major histocompatibility complex, class II, DQ beta 1

GTEx V8

NCBI GeneID : 3119	NCBI : NM_002123.5	NCBI : NP_002114.3
Chromosome : 6	Strand : -
MANE Select : ENST00000434651	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	HLA-DQB1	ENSG00000179344	32659467	32666657
GTEx V9	HLA	ENSG00000179344	32659466	32668383
Gencode v40	HLA-DQB1	ENSG00000179344	32659466	32668383

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000434651	5	1642	4	786	2	55.73	1	☀	P:4	ENST00000434651	5	1605	4	786	2	☀	P:4
	ENST00000399079	4	1501	5	675	4	23.99	2			ENST00000399079	4	1501	5	675	4
	ENST00000487676	3	4644	1	0	7	19.22	3			ENST00000487676	3	4644	1	0	7
	ENST00000460185	2	428	8	0	7	0.56	4			ENST00000460185	2	428	8	0	7
	ENST00000399082	3	1219	6	405	6	0.18	5			ENST00000399082	3	1219	6	405	6
	ENST00000484729	5	783	7	411	5	0.15	6			ENST00000484729	5	783	7	411	5
	ENST00000374943	6	1656	3	810	1	0.15	7		A:2	ENST00000374943	6	1656	3	810	1		A:2
	ENST00000399084	6	1734	2	786	2	0.03	8		P:4	ENST00000399084	6	1734	2	786	2		P:4

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000443574	2	309	9	0	7

ENSG00000179344 HLA

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