GTEx V9
Gene Name : major histocompatibility complex, class II, DQ beta 1
NCBI GeneID : 3119 NCBI : NM_002123.5 NCBI : NP_002114.3
Chromosome : 6 Strand : -
MANE Select : ENST00000434651 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE HLA-DQB1 ENSG00000179344 32659467 32666657
GTEx V9 HLA ENSG00000179344 32659466 32668383
Gencode v40 HLA-DQB1 ENSG00000179344 32659466 32668383

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000434651 5 1642 4 786 2 55.73 1 P:4 ENST00000434651 5 1605 4 786 2 P:4
ENST00000399079 4 1501 5 675 4 23.99 2 ENST00000399079 4 1501 5 675 4
ENST00000487676 3 4644 1 0 7 19.22 3 ENST00000487676 3 4644 1 0 7
ENST00000460185 2 428 8 0 7 0.56 4 ENST00000460185 2 428 8 0 7
ENST00000399082 3 1219 6 405 6 0.18 5 ENST00000399082 3 1219 6 405 6
ENST00000484729 5 783 7 411 5 0.15 6 ENST00000484729 5 783 7 411 5
ENST00000374943 6 1656 3 810 1 0.15 7 A:2 ENST00000374943 6 1656 3 810 1 A:2
ENST00000399084 6 1734 2 786 2 0.03 8 P:4 ENST00000399084 6 1734 2 786 2 P:4
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000443574 2 309 9 0 7

ENSG00000179344 HLA

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