GTEx V9
Gene Name : class II major histocompatibility complex transactivator
NCBI GeneID : 4261 NCBI : NM_000246.4 NCBI : NP_000237.2
Chromosome : 16 Strand : +
MANE Select : ENST00000324288 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE CIITA ENSG00000179583 10877202 10936394
GTEx V9 CIITA ENSG00000179583 10866221 10932281
Gencode v40 CIITA ENSG00000179583 10866221 10943021

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000324288 20 11952 1 3393 2 89.58 1 P:4 ENST00000324288 20 16061 1 3393 2 P:4
ENST00000618327 20 4657 3 3396 1 0.42 7 A:2 ENST00000618327 20 4657 3 3396 1 A:2
ENST00000571545 2 567 9 0 8 0.10 12 ENST00000571545 2 567 16 0 11
ENST00000576601 7 626 8 532 5 0.18 11 ENST00000576601 7 626 15 532 6
ENST00000575513 2 516 11 0 8 0.44 6 ENST00000575513 2 516 18 0 11
ENST00000570546 19 5342 2 0 8 5.62 2 ENST00000570546 19 5342 2 0 11
ENST00000637439 7 850 7 782 4 0.67 4 ENST00000637439 7 850 14 782 5
ENST00000571186 8 1041 6 519 6 0.25 8 ENST00000571186 8 1041 13 519 7
ENST00000573309 10 3366 4 0 8 0.22 9 ENST00000573309 10 3366 4 0 11
ENST00000572665 3 560 10 0 8 1.79 3 ENST00000572665 3 560 17 0 11
ENST00000618207 18 2844 5 1062 3 0.20 10 ENST00000618207 18 2844 6 1062 4
ENST00000571190 1 479 13 0 8 0.44 5 ENST00000571190 1 479 20 0 11
ENST00000636238 6 498 12 418 7 0.08 13 ENST00000636238 6 498 19 418 8
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000381835 18 2344 7 1641 3
ENST00000000000 ENST00000537380 11 1062 12 0 11
ENST00000000000 ENST00000573379 2 2147 10 0 11
ENST00000000000 ENST00000644232 5 2187 9 244 9
ENST00000000000 ENST00000646979 4 1539 11 244 9
ENST00000000000 ENST00000695878 4 2334 8 0 11
ENST00000000000 ENST00000695879 12 2894 5 0 11

ENSG00000179583 CIITA

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