GTEx V9
Gene Name : collagen type IV alpha 1 chain
NCBI GeneID : 1282 NCBI : NM_001845.6 NCBI : NP_001836.3
Chromosome : 13 Strand : -
MANE Select : ENST00000375820 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE COL4A1 ENSG00000187498 110148963 110307157
GTEx V9 COL4A1 ENSG00000187498 110148962 110307149
Gencode v40 COL4A1 ENSG00000187498 110148962 110307157

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000375820 52 6532 1 5010 1 99.28 1 P:1 ENST00000375820 52 6540 1 5010 1 P:1
ENST00000543140 25 2547 2 1560 2 0.69 2 ENST00000543140 25 2549 3 1560 2
ENST00000474391 2 581 5 0 4 0.02 3 ENST00000474391 2 581 16 0 12
ENST00000467182 3 593 4 0 4 0.01 4 ENST00000467182 3 593 14 0 12
ENST00000615732 15 1077 3 670 3 0.01 5 ENST00000615732 16 1111 12 708 5
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000647632 12 1294 11 0 12
ENST00000000000 ENST00000647797 20 2094 6 1244 3
ENST00000000000 ENST00000648170 7 1372 10 0 12
ENST00000000000 ENST00000648695 1 1880 7 62 9
ENST00000000000 ENST00000648966 9 585 15 533 6
ENST00000000000 ENST00000648989 2 213 18 92 8
ENST00000000000 ENST00000649484 8 671 13 446 7
ENST00000000000 ENST00000649720 7 2476 4 0 12
ENST00000000000 ENST00000649738 31 2644 2 0 12
ENST00000000000 ENST00000650115 2 1588 9 39 11
ENST00000000000 ENST00000650138 3 350 17 0 12
ENST00000000000 ENST00000650424 10 2412 5 1160 4
ENST00000000000 ENST00000650566 2 1597 8 54 10

ENSG00000187498 COL4A1

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