TEXMST Gene Info

LIN54

GTEx V9

Gene Name : lin-54 DREAM MuvB core complex component

GTEx V8

NCBI GeneID : 132660	NCBI : NM_194282.4	NCBI : NP_919258.2
Chromosome : 4	Strand : -
MANE Select : ENST00000340417	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	LIN54	ENSG00000189308	82924603	83010823
GTEx V9	LIN54	ENSG00000189308	82909972	83012926
Gencode v40	LIN54	ENSG00000189308	82909972	83012926

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000340417	13	6127	1	2250	1	81.78	1	☀	P:3	ENST00000340417	13	6121	1	2250	1	☀	P:3
	ENST00000510877	13	4507	2	189	7	6.33	2			ENST00000510877	13	4507	2	189	8
	ENST00000505905	4	810	8	0	8	4.28	3			ENST00000505905	4	810	9	0	9
	ENST00000510557	13	2257	7	1587	4	3.19	4		A:1	ENST00000510557	13	2257	8	1587	4		A:1
	ENST00000505397	13	2742	5	2250	1	2.82	5		P:3	ENST00000505397	13	2742	6	2250	1		P:3
	ENST00000506560	11	2757	4	1983	3	1.36	6			ENST00000506560	11	2757	5	1983	3
	ENST00000509748	3	729	9	0	8	0.14	7			ENST00000509748	3	729	10	0	9
	ENST00000508171	11	2684	6	732	6	0.05	8			ENST00000508171	11	2684	7	732	7
	ENST00000442461	13	4254	3	1587	4	0.04	9		A:1	ENST00000442461	13	4254	3	1587	4		A:1

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000446851	13	4083	4	1587	4		A:1

ENSG00000189308 LIN54

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