GTEx V9
Gene Name : synaptonemal complex protein 2
NCBI GeneID : 10388 NCBI : NM_014258.4 NCBI : NP_055073.2
Chromosome : 20 Strand : -
MANE Select : ENST00000357552 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SYCP2 ENSG00000196074 59863571 59933637
GTEx V9 SYCP2 ENSG00000196074 59863562 59933655
Gencode v40 SYCP2 ENSG00000196074 59863563 59933655

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000357552 45 5567 1 4593 1 46.02 1 P:1 ENST00000357552 45 5541 1 4593 1 P:1
ENST00000476314 3 584 4 0 3 23.67 2 ENST00000476314 3 584 6 0 6
ENST00000461538 4 729 3 0 3 13.89 4 ENST00000461538 4 729 4 0 6
ENST00000474749 8 580 5 0 3 15.08 3 ENST00000474749 8 580 7 0 6
ENST00000471331 6 579 6 0 3 0.31 6 ENST00000471331 6 579 8 0 6
ENST00000446834 33 3341 2 3071 2 1.03 5 ENST00000446834 33 3341 3 3071 3
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000371001 44 5479 2 4593 1 P:1
ENST00000000000 ENST00000412613 8 625 5 625 4
ENST00000000000 ENST00000425931 5 488 9 355 5

ENSG00000196074 SYCP2

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