TEXMST Gene Info

Gene Name : transcription factor 4

GTEx V8

NCBI GeneID : 6925	NCBI : NM_001083962.2	NCBI : NP_001077431.1
Chromosome : 18	Strand : -
MANE Select : ENST00000354452	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	TCF4	ENSG00000196628	55222185	55588192
GTEx V9	TCF4	ENSG00000196628	55222330	55664787
Gencode v40	TCF4	ENSG00000196628	55222184	55664787

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000635990	15	7396	10	0	47	0.01	54			ENST00000635990	15	7396	14	0	74
	ENST00000637923	14	7314	11	298	44	0.01	49			ENST00000637923	14	7314	15	298	65
	ENST00000562680	14	5733	13	0	47	15.06	2			ENST00000562680	14	5733	17	0	74
☉	ENST00000630720	9	1552	36	945	29	47.18	1			ENST00000630720	9	1552	44	945	33
	ENST00000627685	9	882	41	612	36	1.23	11			ENST00000627685	9	882	50	612	42
	ENST00000638154	19	7801	6	2013	5	1.45	9			ENST00000638154	19	7946	6	2043	2
	ENST00000626631	2	622	52	246	45	0.98	13			ENST00000626631	2	622	67	246	66
	ENST00000626466	6	1004	39	0	47	0.03	38			ENST00000626466	6	1004	47	0	74
	ENST00000636751	20	8283	3	309	43	0.03	37			ENST00000636751	20	8283	3	309	64
	ENST00000637169	13	7553	8	1368	27	1.74	8			ENST00000637169	13	7553	12	1368	31
	ENST00000570146	4	661	50	500	40	0.11	29			ENST00000570146	4	661	63	500	47
	ENST00000626595	10	833	42	663	33	0.02	43			ENST00000626595	10	833	53	663	39
	ENST00000570287	13	3163	17	1524	25	1.91	7			ENST00000570287	13	3163	20	1524	29
	ENST00000628360	2	463	55	0	47	2.26	5			ENST00000628360	2	463	84	0	74
	ENST00000616053	18	8140	4	1752	18	0.06	33			ENST00000616053	18	8140	4	1752	20
	ENST00000565908	9	805	46	629	34	0.07	31			ENST00000565908	9	805	58	629	40
	ENST00000356073	20	8317	2	2004	6	0.16	26		A:1	ENST00000356073	20	8317	2	2004	6		A:1
	ENST00000637941	4	2115	31	0	47	1.07	12			ENST00000637941	4	2115	34	0	74
	ENST00000457482	13	2372	25	1536	24	14.06	3			ENST00000457482	13	2372	28	1536	28
	ENST00000636400	20	8343	1	1944	9	0.17	24			ENST00000636400	20	8343	1	1944	9
	ENST00000637250	15	7410	9	0	47	0.03	39			ENST00000637250	15	7410	13	0	74
	ENST00000543082	18	2399	23	1878	15	1.25	10			ENST00000543082	18	2399	26	1878	15
	ENST00000566376	4	462	56	0	47	0.27	21			ENST00000566376	4	462	85	0	74
	ENST00000563686	8	6012	12	0	47	0.82	14			ENST00000563686	8	6012	16	0	74
	ENST00000566777	7	653	51	403	41	0.01	47			ENST00000566777	7	653	64	403	59
	ENST00000561831	13	1823	34	1524	25	0.28	20			ENST00000561831	13	1823	42	1524	29
	ENST00000637068	2	142	57	0	47	0.01	49			ENST00000637068	2	142	92	0	74
	ENST00000568740	19	2628	20	1929	13	0.01	48			ENST00000568740	19	2628	23	1929	13
	ENST00000398339	21	2551	22	2322	1	0.02	42			ENST00000398339	21	2551	25	2322	1
	ENST00000562030	7	1084	38	538	38	0.17	25			ENST00000562030	7	1084	46	538	44
	ENST00000564403	20	2696	19	2034	2	0.00	57		A:1	ENST00000564403	20	2696	22	2034	3		A:1
	ENST00000635822	20	7805	5	1896	14	0.03	40			ENST00000635822	20	7805	8	1896	14
	ENST00000561992	16	2184	28	1614	21	0.76	16			ENST00000561992	16	2184	31	1614	25
	ENST00000628078	8	1277	37	622	35	0.22	22			ENST00000628078	8	1277	45	622	41
	ENST00000540999	19	2572	21	1932	12	0.46	19			ENST00000540999	19	2572	24	1932	12
	ENST00000630828	7	735	49	685	31	0.09	30			ENST00000630828	7	735	60	685	37
	ENST00000537856	15	1996	32	1614	21	2.95	4			ENST00000537856	15	1996	36	1614	25
	ENST00000630712	6	831	43	386	42	0.02	44			ENST00000630712	6	831	54	386	60
	ENST00000566286	19	2119	30	1995	8	0.02	46			ENST00000566286	19	2119	33	1995	8
	ENST00000628636	9	826	44	674	32	0.00	56			ENST00000628636	9	826	55	674	38
	ENST00000568673	19	2398	24	1944	9	0.06	34			ENST00000568673	19	2398	27	1944	9
	ENST00000636822	15	7640	7	1626	20	0.06	35			ENST00000636822	15	7640	10	1626	22
	ENST00000537578	19	2767	18	1944	9	0.65	17			ENST00000537578	19	2767	21	1944	9
	ENST00000565018	17	2357	26	1752	18	0.03	41			ENST00000565018	17	2357	29	1752	20
	ENST00000570177	15	1872	33	1614	21	0.12	27			ENST00000570177	15	1872	40	1614	25
	ENST00000631043	6	510	54	0	47	0.06	32			ENST00000631043	6	510	82	0	74
	ENST00000629387	20	3789	14	2016	3	0.81	15		P:3	ENST00000629387	20	3789	18	2016	4		P:3
	ENST00000627568	4	806	45	0	47	0.12	28			ENST00000627568	4	806	57	0	74
	ENST00000562847	7	597	53	169	46	0.01	52			ENST00000562847	7	597	72	169	72
	ENST00000566514	10	969	40	863	30	0.01	55			ENST00000566514	10	969	48	863	34
	ENST00000630319	7	737	48	608	37	0.01	49			ENST00000630319	7	737	59	608	43
	ENST00000626584	13	1701	35	1356	28	0.01	52			ENST00000626584	13	1701	43	1356	32
	ENST00000544241	16	2264	27	1803	17	0.51	18			ENST00000544241	16	2264	30	1803	18
	ENST00000566279	18	2128	29	1836	16	0.02	45			ENST00000566279	18	2128	32	1836	16
	ENST00000354452	20	3482	16	2016	3	2.24	6	☀	P:3	ENST00000354452	20	8041	5	2016	4	☀	P:3
	ENST00000564999	20	3590	15	2004	6	0.19	23		A:1	ENST00000564999	20	3590	19	2004	6		A:1

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000625849	7	784	47	534	39	0.04	36			ENST00000000000
	ENST00000000000										ENST00000562543	7	598	71	418	55
	ENST00000000000										ENST00000562607	6	602	69	491	49
	ENST00000000000										ENST00000562638	5	401	86	356	63
	ENST00000000000										ENST00000563760	7	856	52	0	74
	ENST00000000000										ENST00000563824	6	897	49	476	51
	ENST00000000000										ENST00000563888	7	570	76	438	54
	ENST00000000000										ENST00000564228	16	1915	39	1791	19
	ENST00000000000										ENST00000564343	6	568	77	405	56
	ENST00000000000										ENST00000565124	5	555	79	504	46
	ENST00000000000										ENST00000565393	4	314	89	184	71
	ENST00000000000										ENST00000565580	6	530	81	0	74
	ENST00000000000										ENST00000567880	17	1948	37	1824	17
	ENST00000000000										ENST00000568147	7	550	80	496	48
	ENST00000000000										ENST00000568169	10	870	51	841	35
	ENST00000000000										ENST00000568186	5	583	74	358	62
	ENST00000000000										ENST00000569012	6	561	78	488	50
	ENST00000000000										ENST00000569357	7	585	73	373	61
	ENST00000000000										ENST00000590810	3	362	87	195	69
	ENST00000000000										ENST00000625716	5	359	88	0	74
	ENST00000000000										ENST00000625925	7	606	68	405	56
	ENST00000000000										ENST00000626425	8	579	75	537	45
	ENST00000000000										ENST00000627136	9	624	66	0	74
	ENST00000000000										ENST00000627320	6	699	62	405	56
	ENST00000000000										ENST00000627784	7	601	70	468	52
	ENST00000000000										ENST00000628391	3	201	90	0	74
	ENST00000000000										ENST00000628689	7	721	61	243	68
	ENST00000000000										ENST00000629343	9	807	56	709	36
	ENST00000000000										ENST00000630224	5	501	83	246	66
	ENST00000000000										ENST00000630268	6	635	65	465	53
	ENST00000000000										ENST00000636710	3	161	91	0	74
	ENST00000000000										ENST00000637115	21	7883	7	153	73
	ENST00000000000										ENST00000637239	18	7771	9	0	74
	ENST00000000000										ENST00000637500	2	100	93	0	74
	ENST00000000000										ENST00000643689	15	7577	11	1626	22
	ENST00000000000										ENST00000674598	6	1842	41	0	74
	ENST00000000000										ENST00000674764	17	2057	35	195	69
	ENST00000000000										ENST00000675707	16	1935	38	1626	22

ENSG00000196628 TCF4

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