TEXMST Gene Info

HLA

GTEx V9

Gene Name : major histocompatibility complex, class I, C

GTEx V8

NCBI GeneID : 3107	NCBI : NM_002117.6	NCBI : NP_002108.4
Chromosome : 6	Strand : -
MANE Select : ENST00000376228	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	HLA-C	ENSG00000204525	31268749	31272092
GTEx V9	HLA	ENSG00000204525	31268748	31272130
Gencode v40	HLA-C	ENSG00000204525	31268748	31272130

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000376228	8	1536	4	1101	2	78.61	1	☀	P:4	ENST00000376228	8	1542	3	1101	2	☀	P:4
	ENST00000383329	8	1554	2	1119	1	14.28	2		A:2	ENST00000383329	8	1554	2	1119	1		A:2
	ENST00000487245	6	1880	1	0	6	5.04	3			ENST00000487245	6	1880	1	0	5
	ENST00000470363	4	1279	5	0	6	1.35	4			ENST00000470363	4	1279	5	0	5
	ENST00000466892	2	754	10	0	6	0.30	5			ENST00000466892	2	754	9	0	5
	ENST00000376237	8	1538	3	396	5	0.17	6			ENST00000376237	8	1538	4	396	4
	ENST00000484378	2	862	8	0	6	0.16	7			ENST00000484378	2	862	7	0	5
	ENST00000495835	3	1073	6	0	6	0.06	8			ENST00000495835	3	1073	6	0	5
	ENST00000415537	5	782	9	782	3	0.00	10			ENST00000415537	5	782	8	782	3

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000640219	8	976	7	732	4	0.02	9			ENST00000000000

ENSG00000204525 HLA

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