TEXMST Gene Info

Gene Name : copine 1

GTEx V8

NCBI GeneID : 8904	NCBI : NM_152925.3	NCBI : NP_690902.1
Chromosome : 20	Strand : -
MANE Select : ENST00000397443	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CPNE1	ENSG00000214078	35626044	35664900
GTEx V9	CPNE1	ENSG00000214078	35626030	35664956
Gencode v40	CPNE1	ENSG00000214078	35626030	35664956

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000473373	2	821	14	0	18	39.48	1			ENST00000473373	2	821	14	0	21
	ENST00000462352	2	625	22	0	18	16.58	2			ENST00000462352	2	625	23	0	21
☉	ENST00000397443	16	1928	4	1614	2	15.38	3	☀	P:1	ENST00000397443	16	1952	4	1614	2	☀	P:1
	ENST00000483495	12	1853	5	0	18	6.63	4			ENST00000483495	12	1853	5	0	21
	ENST00000352393	18	2147	1	1614	2	4.25	5		P:1	ENST00000352393	18	2147	1	1614	2		P:1
	ENST00000498814	3	550	23	0	18	3.98	6			ENST00000498814	3	550	25	0	21
	ENST00000397442	16	1695	8	1446	5	3.67	7			ENST00000397442	16	1695	8	1446	5
	ENST00000414664	11	1070	10	913	9	2.64	8			ENST00000414664	11	1070	10	913	9
	ENST00000498056	2	362	25	0	18	2.05	9			ENST00000498056	2	362	28	0	21
	ENST00000437340	16	1755	7	1600	4	1.62	10			ENST00000437340	16	1755	7	1600	4
	ENST00000415920	4	731	19	626	13	0.90	11			ENST00000415920	4	731	20	626	13
	ENST00000430570	13	1332	9	1159	7	0.81	12			ENST00000430570	13	1332	9	1159	7
	ENST00000483359	15	1975	2	0	18	0.73	13			ENST00000483359	15	1975	2	0	21
	ENST00000317677	16	1961	3	1629	1	0.56	14			ENST00000317677	16	1961	3	1629	1
	ENST00000420363	8	821	14	627	12	0.17	15			ENST00000420363	8	821	14	627	12
	ENST00000486021	6	506	24	0	18	0.16	16			ENST00000486021	6	506	26	0	21
	ENST00000412056	10	998	11	916	8	0.13	17			ENST00000412056	10	998	11	916	8
	ENST00000439806	8	748	17	694	10	0.08	18			ENST00000439806	8	748	17	694	10
	ENST00000434795	8	831	12	605	14	0.07	19			ENST00000434795	8	831	12	605	14
	ENST00000475146	2	627	21	0	18	0.05	20			ENST00000475146	2	627	22	0	21
	ENST00000437100	7	826	13	456	15	0.04	21			ENST00000437100	7	826	13	456	16
	ENST00000401607	16	1795	6	1284	6	0.01	22			ENST00000401607	16	1795	6	1284	6
	ENST00000416778	7	744	18	640	11	0.00	23			ENST00000416778	7	744	19	640	11
	ENST00000439669	8	784	16	417	16	0.00	24			ENST00000439669	8	784	16	417	17
	ENST00000414711	7	673	20	409	17	0.00	25			ENST00000414711	7	673	21	409	19

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000435747	3	400	27	200	20
	ENST00000000000										ENST00000440240	7	746	18	522	15
	ENST00000000000										ENST00000458038	6	596	24	413	18

ENSG00000214078 CPNE1

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