GTEx V9
Gene Name : collagen type XXVIII alpha 1 chain
NCBI GeneID : 340267 NCBI : NM_001037763.3 NCBI : NP_001032852.2
Chromosome : 7 Strand : -
MANE Select : ENST00000399429 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE COL28A1 ENSG00000215018 7357875 7535873
GTEx V9 COL28A1 ENSG00000215018 7356202 7535853
Gencode v40 COL28A1 ENSG00000215018 7356202 7535873

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000399429 35 4277 1 3378 1 37.56 2 P:1 ENST00000399429 35 4297 1 3378 1 P:1
ENST00000430711 4 2323 2 429 2 60.32 1 ENST00000430711 4 2323 2 429 2
ENST00000453441 3 700 4 243 4 0.24 5 ENST00000453441 3 700 5 243 4
ENST00000444268 23 1755 3 204 5 1.42 3 ENST00000444268 23 1755 3 204 5
ENST00000435823 5 678 5 393 3 0.46 4 ENST00000435823 5 678 6 393 3
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000465339 2 722 4 0 6

ENSG00000215018 COL28A1

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