GTEx V9
Gene Name : protocadherin gamma subfamily C, 3
NCBI GeneID : 5098 NCBI : NM_002588.4 NCBI : NP_002579.2
Chromosome : 5 Strand : +
MANE Select : ENST00000308177 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE PCDHGC3 ENSG00000240184 141475966 141512975
GTEx V9 PCDHGC3 ENSG00000240184 141475946 141512979
Gencode v40 PCDHGC3 ENSG00000240184 141475946 141512977

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000617641 4 2346 3 405 4 27.26 2 ENST00000617641 4 2346 3 405 5
ENST00000308177 4 4725 1 2805 1 58.93 1 P:1 ENST00000308177 4 4758 1 2805 1 P:1
ENST00000611950 1 2849 2 2592 2 8.36 3 ENST00000611950 1 2849 2 2592 2
ENST00000622836 2 795 5 0 5 3.61 4 ENST00000622836 2 795 6 0 6
ENST00000616230 2 937 4 0 5 0.02 6 ENST00000616230 2 937 4 0 6
ENST00000617222 5 731 6 558 3 0.01 7 ENST00000617222 5 731 7 558 4
ENST00000622656 5 632 7 0 5 1.81 5 ENST00000622656 5 632 8 0 6
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000621008 2 845 5 727 3

ENSG00000240184 PCDHGC3

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