GTEx V8
Gene Name : cadherin 1
NCBI GeneID : 999 NCBI : NM_004360.5 NCBI : NP_004351.1
Chromosome : 16 Strand : +
MANE Select : ENST00000261769 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE CDH1 ENSG00000039068 68737292 68835537
GTEx V8 CDH1 ENSG00000039068 68737224 68835548
Gencode v40 CDH1 ENSG00000039068 68737291 68835537

Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000261769 16 4889 1 2649 2 56.18 1 P:1 ENST00000261769 16 4811 1 2649 1 P:1
ENST00000562118 4 952 10 0 9 6.18 3 ENST00000562118 4 952 7 0 6
ENST00000565810 2 282 14 0 9 2.27 4 ENST00000565810 2 282 11 0 6
ENST00000566612 15 4138 3 1614 6 0.58 5 ENST00000566612 15 4138 2 1614 3
ENST00000564745 4 581 12 0 9 0.29 6 ENST00000564745 4 581 9 0 6
ENST00000567320 2 352 13 0 9 0.18 7 ENST00000567320 2 352 10 0 6
ENST00000561751 5 736 11 466 8 0.10 8 ENST00000561751 5 736 8 466 5
ENST00000566510 15 2661 6 1245 7 0.07 10 ENST00000566510 15 2661 4 1245 4
ENST00000564676 4 969 9 0 9 0.06 11 ENST00000564676 4 969 6 0 6
ENST00000422392 15 2567 7 2466 3 0.01 13 ENST00000422392 15 2567 5 2466 2
ENST00000562836 15 2759 5 0 9 0.01 14 ENST00000562836 15 2759 3 0 6
Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000621016 13 3304 4 1944 4 33.94 2 ENST00000000000
ENST00000611625 17 4878 2 2712 1 0.08 9 ENST00000000000
ENST00000612417 14 2068 8 1944 4 0.05 12 ENST00000000000

ENSG00000039068 CDH1

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