GTEx V9
Gene Name : cadherin 1
NCBI GeneID : 999 NCBI : NM_004360.5 NCBI : NP_004351.1
Chromosome : 16 Strand : +
MANE Select : ENST00000261769 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE CDH1 ENSG00000039068 68737292 68835537
GTEx V9 CDH1 ENSG00000039068 68737224 68835548
Gencode v40 CDH1 ENSG00000039068 68737291 68835537

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000261769 16 4889 1 2649 1 62.68 1 P:1 ENST00000261769 16 4811 1 2649 1 P:1
ENST00000564745 4 581 7 0 6 25.87 2 ENST00000564745 4 581 9 0 6
ENST00000562118 4 952 6 0 6 6.14 3 ENST00000562118 4 952 7 0 6
ENST00000566612 15 4138 2 1614 4 1.27 5 ENST00000566612 15 4138 2 1614 3
ENST00000567320 2 352 8 0 6 0.84 6 ENST00000567320 2 352 10 0 6
ENST00000566510 15 2661 4 1245 5 0.44 7 ENST00000566510 15 2661 4 1245 4
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000621016 13 3304 3 1944 2 2.41 4 ENST00000000000
ENST00000612417 14 2068 5 1944 2 0.35 8 ENST00000000000
ENST00000000000 ENST00000422392 15 2567 5 2466 2
ENST00000000000 ENST00000561751 5 736 8 466 5
ENST00000000000 ENST00000562836 15 2759 3 0 6
ENST00000000000 ENST00000564676 4 969 6 0 6
ENST00000000000 ENST00000565810 2 282 11 0 6

ENSG00000039068 CDH1

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