TEXMST Gene Info

Gene Name : LIM domain only 3

GTEx V9

NCBI GeneID : 55885	NCBI : NM_018640.5	NCBI : NP_061110.2
Chromosome : 12	Strand : -
MANE Select : ENST00000537304	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	LMO3	ENSG00000048540	16548372	16606162
GTEx V8	LMO3	ENSG00000048540	16548372	16610594
Gencode v40	LMO3	ENSG00000048540	16548371	16610594

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000447609	5	3365	8	438	4	17.02	2		A:1	ENST00000447609	5	3365	9	438	4		A:1
	ENST00000537304	4	1685	11	438	4	9.76	3	☀	A:1	ENST00000537304	4	3393	8	438	4	☀	A:1
	ENST00000536172	5	587	23	183	25	4.21	4			ENST00000536172	5	587	22	183	24
	ENST00000541764	7	1489	14	279	19	2.40	5			ENST00000541764	7	1489	13	279	18
	ENST00000261169	4	3810	1	471	3	2.27	6		P:4	ENST00000261169	4	3810	1	471	3		P:4
	ENST00000441439	5	3515	6	438	4	2.19	7		A:1	ENST00000441439	5	3515	6	438	4		A:1
	ENST00000354662	4	3574	4	438	4	1.71	8		A:1	ENST00000354662	4	3574	4	438	4		A:1
	ENST00000543721	3	3626	3	0	30	1.45	9			ENST00000543721	3	3626	3	0	29
	ENST00000546281	5	496	34	356	14	1.03	10			ENST00000546281	5	496	33	356	13
	ENST00000396205	5	3534	5	210	23	1.00	11			ENST00000396205	5	3534	5	210	22
	ENST00000541295	4	3498	7	492	2	0.73	12			ENST00000541295	4	3498	7	492	2
	ENST00000439600	2	1044	16	0	30	0.73	13			ENST00000439600	2	1044	15	0	29
	ENST00000540445	6	906	19	504	1	0.65	14			ENST00000540445	6	906	18	504	1
	ENST00000544754	4	555	28	210	23	0.61	15			ENST00000544754	4	555	27	210	22
	ENST00000540590	3	565	27	253	21	0.56	16			ENST00000540590	3	565	26	253	20
	ENST00000332914	3	549	30	0	30	0.55	17			ENST00000332914	3	549	29	0	29
	ENST00000424192	6	983	18	213	22	0.44	18			ENST00000424192	6	983	17	213	21
	ENST00000541846	4	573	26	438	4	0.38	19		A:1	ENST00000541846	4	573	25	438	4		A:1
	ENST00000537757	5	516	33	356	14	0.26	20			ENST00000537757	5	516	32	356	13
	ENST00000534946	5	1016	17	438	4	0.21	21		A:1	ENST00000534946	5	1016	16	438	4		A:1
	ENST00000453727	5	2403	10	183	25	0.19	22			ENST00000453727	5	2403	10	183	24
	ENST00000538020	2	622	20	175	29	0.18	23			ENST00000538020	2	622	19	175	28
	ENST00000539232	4	580	24	183	25	0.18	24			ENST00000539232	4	580	23	183	24
	ENST00000541589	4	1499	13	183	25	0.17	25			ENST00000541589	4	1499	12	183	24
	ENST00000544276	3	460	35	0	30	0.16	26			ENST00000544276	3	460	34	0	29
	ENST00000545436	3	530	32	264	20	0.11	27			ENST00000545436	3	530	31	264	19
	ENST00000538051	3	579	25	292	18	0.07	28			ENST00000538051	3	579	24	292	17
	ENST00000536509	4	550	29	0	30	0.05	29			ENST00000536509	4	550	28	0	29
	ENST00000546279	4	590	22	332	17	0.04	30			ENST00000546279	4	590	21	332	16
	ENST00000539534	4	543	31	356	14	0.03	31			ENST00000539534	4	543	30	356	13
	ENST00000537568	3	594	21	0	30	0.02	32			ENST00000537568	3	594	20	0	29
	ENST00000320122	4	3759	2	438	4	0.01	33		A:1	ENST00000320122	4	3759	2	438	4		A:1
	ENST00000540848	5	1574	12	438	4	0.00	34		A:1	ENST00000540848	5	1574	11	438	4		A:1
	ENST00000535535	4	1488	15	438	4	0.00	35		A:1	ENST00000535535	4	1488	14	438	4		A:1

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000616247	4	3227	9	378	13	50.61	1			ENST00000000000

ENSG00000048540 LMO3

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